Demo/Screen Shots
| General Overview of Tools | Basic Browser Navigation | Setting up Custom Tracks/Views |
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Try the genome browser:
Feature List
Interactively explore Genomic Data/Transcriptomic Data (including RNA-Seq and Microarray Data) along a region of the genome.
- View Rat Brain, Liver and Heart Isoforms from RNA-Seq transcriptome reconstruction
- View Rat SNPs/Short Indels for BN-Lx/CubPrin, SHR/OlaPrin, F344, and SHR/NCrlPrin with more coming soon
- View Ensembl Isoforms
- View Affymetrix Exon 1.0 ST Microarray Probe set locations, detection above background accross tissues, and heritability.
- View bQTLs
- View eQTLs for the genes in the region
- View genes with an eQTL in the region
- View WGCNA data for genes contained in the region
- View transcripts/genes assigned to modules along with the correlations between them.
- View Module Eigengene eQTLs for modules.
- View Gene Ontology summaries for annotated genes within a module.
- View predicted and validated miRNAs that target genes in the module.