Mouse          Rat          Home

Mus Musculus
Inbred Strains
Number of Strains	Type of Samples	Number of Arrays Per Strain	Array	Strains
28	whole brain from adult male mice	4 to 6	Affymetrix Mouse 430 version 2 (3 targeted)	129P3/J, 129S1/SvImJ, 129X1/SvJ, A/J, AKR/J, Balb/cJ, BTBR T+tf/J, Balb/cByJ, C3H/HeJ, C57BL/6J, C58/J, CAST/EiJ, CBA/J, DBA/2J, FVB/NJ, ILS, ISS, KK/H1J, LP/J, Molf/EiJ, NOD/LtJ, NZO/HILtJ, NZW/LacJ, PWD/PhJ, PWK/PhJ, SJL/J, SPRET/EiJ, WSB/EiJ
4	whole brain from adult male mice	6 to 36	Affymetrix Mouse Exon Array	C57BL/6J, DBA/2J, ILS, ISS
Recombinant Inbred Panels
Number of Strains	Type of Samples	Number of Arrays Per Strain	Array	Strains
32	whole brain from adult male mice	4 to 7	Affymetrix Mouse 430 version 2 (3 targeted)	BXD1, BXD2, BXD5, BXD6, BXD8, BXD9, BXD11, BXD12, BXD13, BXD14, BXD15, BXD16, BXD18, BXD19, BXD21, BXD22, BXD23, BXD24, BXD27, BXD28, BXD29, BXD31, BXD32, BXD33, BXD34, BXD36, BXD38, BXD39, BXD40, BXD42, DBA, C57
62	whole brain from adult male mice	4 to 6	Affymetrix Mouse Exon Array	LXS100, LXS101, LXS102, LXS103, LXS107, LXS110, LXS112, LXS114, LXS115, LXS122, LXS123, LXS13, LXS14, LXS16, LXS19, LXS22, LXS23, LXS24, LXS25, LXS26, LXS28, LXS3, LXS32, LXS34, LXS36, LXS39, LXS41, LXS42, LXS43, LXS46, LXS48, LXS49, LXS5, LXS50, LXS52, LXS60, LXS64, LXS66, LXS7, LXS70, LXS72, LXS73, LXS75, LXS76, LXS78, LXS8, LXS80, LXS84, LXS86, LXS87, LXS89, LXS9, LXS90, LXS92, LXS93, LXS94, LXS96, LXS97, LXS98, LXS99, ILS, ISS
Selected Lines
Number of Pairs	Type of Samples	Number of Arrays Per Line	Array	Lines
7	whole brain from adult male mice	4 to 6	Affymetrix Mouse 430 version 2 (3 targeted)	HAFT1/LAFT1, HAFT2/LAFT2, HAP1/LAP1, HAP2/LAP2, HAP3/LAP3, iHAFT/iLAFT, ILS/ISS
Genetically Modified Animals
Number of Pairs	Type of Samples	Number of Arrays Per Group	Array	Modifications
8	multiple	3 to 6	Affymetrix Mouse 430 version 2 (3 targeted)	Fyn KO, Maob KO, Maoa KO, Maoa and Maob KO, P14TCR transgenic, Spinophilin KO, AC7 transgentic, AC7 KO

Mouse          Rat          Home

Rattus Norvegicus
Inbred Strains (Cells and Tissues)
Number of Strains	Type of Samples	Number of Arrays Per Strain	Array	Strains
3	whole brain from adult male rats	4 to 6	CodeLink Whole Genome Rat Array	BN-Lx/Cub, SHR/OlaIpcv, SHR-Lx/Cub
6	whole brain from adult male rats	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv, SHR-Lx/Cub, WKY/Ztm
6	heart - left ventrical from adult male rats	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv, SHR-Lx/Cub, WKY/Ztm
6	liver from adult male rats	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv, SHR-Lx/Cub, WKY/Ztm
6	brown fat from adult male rats*	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv, SHR-Lx/Cub, WKY/Ztm
6	white fat brain from adult male rats*	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv, SHR-Lx/Cub, WKY/Ztm
4	Kupffer cells from liver (fresh/cultured/MACS)	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv
4	Hepatic Stellate cells from liver (fresh)	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv
4	hepatocyte cells from liver (fresh/cultured)	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv
4	sinusoidal edotheliad cells from liver (fresh/cultured)	4	Affymetrix Rat Exon Array	BN-Lx/Cub, PD/Cub, SHR/NCrl, SHR/OlaIpcv
Recombinant Inbred Panels
Number of Strains	Type of Samples	Number of Arrays Per Strain	Array	Strains
28	whole brain from adult male rats	4 to 6	CodeLink Whole Genome Rat Array	BN-Lx/Cub, BXH08, BXH10, BXH11, BXH12, BXH13, BXH5, BXH6, BXH8, BXH9, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB20, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaIpcv
23	whole brain from adult male rats	3 to 4	Affymetrix Rat Exon Array	BN-Lx/Cub, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaIpcv
23	heart - left ventrical from adult male rats	3 to 4	Affymetrix Rat Exon Array	BN-Lx/Cub, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaIpcv
23	liver from adult male rats	3 to 4	Affymetrix Rat Exon Array	BN-Lx/Cub, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaIpcv
23	brown fat from adult male rats*	3 to 4	Affymetrix Rat Exon Array	BN-Lx/Cub, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaIpcv
23	white fat from adult male rats*	3 to 4	Affymetrix Rat Exon Array	BN-Lx/Cub, BXH08, BXH10, BXH11, BXH13, BXH6, HXB1, HXB10, HXB13, HXB15, HXB17, HXB18, HXB2, HXB23, HXB25, HXB26, HXB27, HXB29, HXB3, HXB31, HXB4, HXB7, SHR/OlaIpcv
Selected Lines
Number of Pairs	Type of Samples	Number of Arrays Per Line	Array	Lines
8	whole brain from adult male rats	4 to 6	CodeLink Whole Genome Rat Array	AA/ANA, HAD1/LAD1, HAD2/LAD2, IHAS1/ILAS1, IHAS2/ILAS2, P/NP, sP/sNP, UChA/Uchb
6	whole brain from adult male rats	4 to 6	Affymetrix Rat Exon Array	AA/ANA, HAD1/LAD1, HAD2/LAD2, P/NP, sP/sNP, UChA/Uchb
*These arrays are projected to be available Summer 2011.

©2011 Regents of the University of Colorado. All Rights Reserved.